Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 GPX1-201ENST00000419349 1106 ntBASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 Z92544.1-202ENST00000571933 1220 ntBASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SPTSSBQ8NFR3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 AC012317.2-201ENST00000623305 2251 ntBASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 AC133637.1-201ENST00000624115 1537 ntBASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 NKILA-202ENST00000614771 2598 ntBASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 AC104581.4-201ENST00000623126 3052 ntBASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SPTSSBQ8NFR3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.08□□□□□ -0.8
SPTSSBQ8NFR3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms