Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RTL3Q8N8U3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 HLA-F-220ENST00000434407 884 ntBASIC18.83■□□□□ 0.6
RTL3Q8N8U3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 AL024508.2-201ENST00000607749 1894 ntBASIC18.83■□□□□ 0.6
RTL3Q8N8U3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTL3Q8N8U3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 HBZP1-201ENST00000354915 429 ntBASIC18.82■□□□□ 0.6
RTL3Q8N8U3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 AL590326.2-201ENST00000625139 305 ntBASIC18.82■□□□□ 0.6
RTL3Q8N8U3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL3Q8N8U3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 ESPNP-201ENST00000270691 2015 ntBASIC18.81■□□□□ 0.6
RTL3Q8N8U3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
RTL3Q8N8U3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 AL671277.2-201ENST00000458060 996 ntBASIC18.81■□□□□ 0.6
RTL3Q8N8U3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 NTF6B-201ENST00000591913 560 ntBASIC18.81■□□□□ 0.6
RTL3Q8N8U3 LINC01311-201ENST00000565162 1445 ntBASIC18.81■□□□□ 0.6
RTL3Q8N8U3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 AL162741.1-201ENST00000565563 1558 ntBASIC18.81■□□□□ 0.6
RTL3Q8N8U3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL3Q8N8U3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.8■□□□□ 0.6
RTL3Q8N8U3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms