Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 KRT8P47-201ENST00000604727 1398 ntBASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF28Q8N1W1 TP73-AS1-210ENST00000637775 1455 ntBASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 MTCL1P1-201ENST00000446207 792 ntBASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 AL031598.1-201ENST00000561511 1773 ntBASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 AC125634.1-201ENST00000438758 1403 ntBASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.36■■□□□ 1.65
ARHGEF28Q8N1W1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 LINC01711-201ENST00000598340 967 ntBASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 AC011467.2-201ENST00000598425 242 ntBASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 BX640515.1-201ENST00000617215 977 ntBASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 AL355877.3-201ENST00000622820 899 ntBASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
ARHGEF28Q8N1W1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 MED22-202ENST00000371999 987 ntTSL 3 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 RBM17P3-201ENST00000417687 1192 ntBASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC25.34■■□□□ 1.65
ARHGEF28Q8N1W1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 NME4-212ENST00000621774 904 ntTSL 3 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC25.33■■□□□ 1.65
ARHGEF28Q8N1W1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
ARHGEF28Q8N1W1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 RCN1P2-201ENST00000398357 915 ntBASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 FAM197Y8-203ENST00000450145 560 ntBASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AL591684.3-201ENST00000605187 298 ntBASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms