Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 AL450487.1-201ENST00000426799 995 ntBASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC60Q8IWA6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AC120498.9-201ENST00000339021 3867 ntBASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AC113404.2-201ENST00000507884 177 ntBASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AP000867.3-201ENST00000524675 377 ntBASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AL121894.2-201ENST00000602977 491 ntBASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AC124864.1-201ENST00000623408 392 ntBASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC60Q8IWA6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 PRELID1P1-202ENST00000567272 903 ntBASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC60Q8IWA6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 AC018445.3-201ENST00000624177 1945 ntBASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 AL845331.1-201ENST00000424978 1190 ntBASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 GUSBP12-201ENST00000513727 720 ntBASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC60Q8IWA6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms