Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 TSPY19P-201ENST00000418461 509 ntBASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 TSPY18P-201ENST00000441642 509 ntBASIC20.47■□□□□ 0.87
TRIM50Q86XT4 RN7SL606P-201ENST00000472779 293 ntBASIC20.47■□□□□ 0.87
TRIM50Q86XT4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AP005901.3-202ENST00000581653 237 ntBASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 AC124864.1-201ENST00000623408 392 ntBASIC20.47■□□□□ 0.87
TRIM50Q86XT4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM50Q86XT4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 AC104819.1-201ENST00000504587 486 ntBASIC20.46■□□□□ 0.87
TRIM50Q86XT4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM50Q86XT4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRIM50Q86XT4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 KRT89P-201ENST00000620027 1478 ntBASIC20.45■□□□□ 0.86
TRIM50Q86XT4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 SDHAP2-201ENST00000455183 2001 ntBASIC20.45■□□□□ 0.86
TRIM50Q86XT4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 MIR149-201ENST00000384879 89 ntBASIC20.45■□□□□ 0.86
TRIM50Q86XT4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TRIM50Q86XT4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 AC009102.3-201ENST00000623118 1491 ntBASIC20.44■□□□□ 0.86
TRIM50Q86XT4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 MYLKP1-201ENST00000509077 1580 ntBASIC20.44■□□□□ 0.86
TRIM50Q86XT4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.44■□□□□ 0.86
TRIM50Q86XT4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM50Q86XT4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRIM50Q86XT4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms