Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF130Q86XS8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF130Q86XS8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF130Q86XS8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 KRT8P50-201ENST00000562022 1438 ntBASIC17.31■□□□□ 0.36
RNF130Q86XS8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 MIR4674-201ENST00000582457 87 ntBASIC17.31■□□□□ 0.36
RNF130Q86XS8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 AC026471.5-201ENST00000615068 467 ntBASIC17.31■□□□□ 0.36
RNF130Q86XS8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF130Q86XS8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF130Q86XS8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 MIR3180-5-201ENST00000583743 153 ntBASIC17.3■□□□□ 0.36
RNF130Q86XS8 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.3■□□□□ 0.36
RNF130Q86XS8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF130Q86XS8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF130Q86XS8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 Z99916.2-201ENST00000604037 246 ntBASIC17.29■□□□□ 0.36
RNF130Q86XS8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF130Q86XS8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF130Q86XS8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms