Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.33e-6■□□□□ 10.5
SND1Q7KZF4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.234e-6■□□□□ 10.5
SND1Q7KZF4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.16■□□□□ 0.024e-6■□□□□ 10.5
SND1Q7KZF4 ALAS2-205ENST00000463868 646 ntTSL 314.45□□□□□ -0.14e-6■□□□□ 10.5
SND1Q7KZF4 ALAS2-207ENST00000493869 658 ntTSL 214.45□□□□□ -0.14e-6■□□□□ 10.5
SND1Q7KZF4 ALAS2-206ENST00000477869 582 ntTSL 512.4□□□□□ -0.424e-6■□□□□ 10.5
SND1Q7KZF4 ALAS2-204ENST00000455688 664 ntTSL 26.66□□□□□ -1.344e-6■□□□□ 10.5
SND1Q7KZF4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.371e-6■□□□□ 10.5
SND1Q7KZF4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.499e-11■□□□□ 10.5
SND1Q7KZF4 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.049e-11■□□□□ 10.5
SND1Q7KZF4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.016e-7■□□□□ 10.5
SND1Q7KZF4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.076e-7■□□□□ 10.5
SND1Q7KZF4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.62□□□□□ -0.076e-7■□□□□ 10.5
SND1Q7KZF4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.16e-7■□□□□ 10.5
SND1Q7KZF4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.37□□□□□ -0.116e-7■□□□□ 10.5
SND1Q7KZF4 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.156e-7■□□□□ 10.5
SND1Q7KZF4 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC12.29□□□□□ -0.446e-7■□□□□ 10.5
SND1Q7KZF4 CNBP-206ENST00000502372 1026 ntTSL 510.56□□□□□ -0.726e-7■□□□□ 10.5
SND1Q7KZF4 SMOC1-204ENST00000555917 570 ntTSL 413.71□□□□□ -0.219e-8■□□□□ 10.5
SND1Q7KZF4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.286e-7■□□□□ 10.5
SND1Q7KZF4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.22■□□□□ 0.996e-7■□□□□ 10.5
SND1Q7KZF4 AC096887.1-202ENST00000607283 690 ntAPPRIS P5 TSL 513.63□□□□□ -0.236e-7■□□□□ 10.5
SND1Q7KZF4 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.846e-7■□□□□ 10.5
SND1Q7KZF4 AC096887.1-201ENST00000607495 823 ntAPPRIS ALT2 TSL 59.59□□□□□ -0.876e-7■□□□□ 10.5
SND1Q7KZF4 GART-203ENST00000381815 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.672e-9■□□□□ 10.5
SND1Q7KZF4 GART-206ENST00000424203 3571 ntTSL 1 (best)8.06□□□□□ -1.122e-9■□□□□ 10.5
SND1Q7KZF4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.132e-9■□□□□ 10.5
SND1Q7KZF4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.342e-9■□□□□ 10.5
SND1Q7KZF4 NUDT5-209ENST00000537776 1201 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.432e-7■□□□□ 10.5
SND1Q7KZF4 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.722e-7■□□□□ 10.5
SND1Q7KZF4 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC10.4□□□□□ -0.742e-7■□□□□ 10.5
SND1Q7KZF4 NUDT5-208ENST00000498825 473 ntTSL 210.2□□□□□ -0.782e-7■□□□□ 10.5
SND1Q7KZF4 NUDT5-201ENST00000378927 1258 ntTSL 2 BASIC10.06□□□□□ -0.82e-7■□□□□ 10.5
SND1Q7KZF4 NUDT5-206ENST00000476462 622 ntTSL 210.06□□□□□ -0.82e-7■□□□□ 10.5
SND1Q7KZF4 NUDT5-204ENST00000378952 917 ntTSL 58.85□□□□□ -0.992e-7■□□□□ 10.5
SND1Q7KZF4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.41□□□□□ -1.222e-7■□□□□ 10.5
SND1Q7KZF4 MYH9-210ENST00000486218 788 ntTSL 319.68■□□□□ 0.741e-9■□□□□ 10.5
SND1Q7KZF4 LDHA-221ENST00000543445 576 ntTSL 39.03□□□□□ -0.964e-27■□□□□ 10.5
SND1Q7KZF4 SEC62-206ENST00000470355 370 ntTSL 34.66□□□□□ -1.665e-9■□□□□ 10.5
SND1Q7KZF4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.21e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.29■□□□□ 0.21e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-206ENST00000530019 550 ntTSL 416.29■□□□□ 0.21e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-211ENST00000534719 788 ntTSL 1 (best)14.17□□□□□ -0.141e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-210ENST00000534180 983 ntTSL 214.01□□□□□ -0.171e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-208ENST00000532829 912 ntTSL 213.39□□□□□ -0.271e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-205ENST00000529631 507 ntTSL 4 BASIC13.06□□□□□ -0.321e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-209ENST00000533138 885 ntTSL 511.73□□□□□ -0.531e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-203ENST00000529191 530 ntTSL 2 BASIC11.63□□□□□ -0.551e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-204ENST00000529548 567 ntTSL 310.53□□□□□ -0.721e-36■□□□□ 10.5
SND1Q7KZF4 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.011e-36■□□□□ 10.5
SND1Q7KZF4 SPTLC1-202ENST00000337841 946 ntTSL 1 (best) BASIC12.42□□□□□ -0.426e-6■□□□□ 10.4
SND1Q7KZF4 SPTLC1-205ENST00000477888 359 ntTSL 57.64□□□□□ -1.196e-6■□□□□ 10.4
SND1Q7KZF4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.134e-18■□□□□ 10.4
SND1Q7KZF4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.374e-18■□□□□ 10.4
SND1Q7KZF4 RPLP2-208ENST00000532004 353 ntTSL 315.97■□□□□ 0.154e-18■□□□□ 10.4
SND1Q7KZF4 RPLP2-206ENST00000530398 313 ntTSL 312.07□□□□□ -0.484e-18■□□□□ 10.4
SND1Q7KZF4 RPLP2-203ENST00000525722 489 ntTSL 211.58□□□□□ -0.564e-18■□□□□ 10.4
SND1Q7KZF4 RPLP2-204ENST00000526222 350 ntTSL 211.58□□□□□ -0.564e-18■□□□□ 10.4
SND1Q7KZF4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.021e-8■□□□□ 10.4
SND1Q7KZF4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.04□□□□□ -1.281e-8■□□□□ 10.4
SND1Q7KZF4 CCT3-210ENST00000463132 610 ntTSL 37.98□□□□□ -1.131e-6■□□□□ 10.4
SND1Q7KZF4 CCT3-209ENST00000446905 593 ntTSL 36.66□□□□□ -1.341e-6■□□□□ 10.4
SND1Q7KZF4 CCT3-214ENST00000490221 696 ntTSL 26.66□□□□□ -1.341e-6■□□□□ 10.4
SND1Q7KZF4 HSPA9-204ENST00000504902 887 ntTSL 515.28■□□□□ 0.043e-7■□□□□ 10.4
SND1Q7KZF4 HSPA9-207ENST00000507097 1796 ntTSL 215.16■□□□□ 0.023e-7■□□□□ 10.4
SND1Q7KZF4 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.623e-7■□□□□ 10.4
SND1Q7KZF4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.689e-13■□□□□ 10.4
SND1Q7KZF4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.49■■□□□ 1.679e-13■□□□□ 10.4
SND1Q7KZF4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.479e-13■□□□□ 10.4
SND1Q7KZF4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.479e-13■□□□□ 10.4
SND1Q7KZF4 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC12.59□□□□□ -0.399e-13■□□□□ 10.4
SND1Q7KZF4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.85□□□□□ -1.159e-13■□□□□ 10.4
SND1Q7KZF4 HIST1H4C-201ENST00000377803 435 ntAPPRIS P1 BASIC12.39□□□□□ -0.434e-16■□□□□ 10.4
SND1Q7KZF4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.1□□□□□ -1.116e-8■□□□□ 10.4
SND1Q7KZF4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.61□□□□□ -1.196e-8■□□□□ 10.4
SND1Q7KZF4 YWHAZ-222ENST00000523848 664 ntTSL 57.19□□□□□ -1.266e-8■□□□□ 10.4
SND1Q7KZF4 GPRC5C-209ENST00000582444 550 ntTSL 410.69□□□□□ -0.77e-8■□□□□ 10.4
SND1Q7KZF4 NFE2L1-205ENST00000577411 562 ntTSL 518.97■□□□□ 0.631e-6■□□□□ 10.4
SND1Q7KZF4 NFE2L1-220ENST00000584634 588 ntTSL 418.69■□□□□ 0.581e-6■□□□□ 10.4
SND1Q7KZF4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.381e-6■□□□□ 10.4
SND1Q7KZF4 FLNA-213ENST00000466325 828 ntTSL 216.21■□□□□ 0.191e-6■□□□□ 10.4
SND1Q7KZF4 NFE2L1-217ENST00000583210 512 ntTSL 416.18■□□□□ 0.181e-6■□□□□ 10.4
SND1Q7KZF4 LTBP4-217ENST00000597151 285 ntTSL 215.73■□□□□ 0.111e-6■□□□□ 10.4
SND1Q7KZF4 FLNA-205ENST00000415241 704 ntTSL 515.6■□□□□ 0.091e-6■□□□□ 10.4
SND1Q7KZF4 NFE2L1-210ENST00000580037 583 ntTSL 415.28■□□□□ 0.041e-6■□□□□ 10.4
SND1Q7KZF4 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.86□□□□□ -0.031e-6■□□□□ 10.4
SND1Q7KZF4 MKLN1-209ENST00000494785 2386 ntTSL 1 (best)11.61□□□□□ -0.551e-6■□□□□ 10.4
SND1Q7KZF4 MARS-228ENST00000552371 699 ntTSL 311.13□□□□□ -0.631e-6■□□□□ 10.4
SND1Q7KZF4 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.671e-6■□□□□ 10.4
SND1Q7KZF4 RSL24D1-203ENST00000562993 940 ntTSL 310.36□□□□□ -0.751e-6■□□□□ 10.4
SND1Q7KZF4 MKLN1-206ENST00000458153 2448 ntTSL 29.45□□□□□ -0.91e-6■□□□□ 10.4
SND1Q7KZF4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.881e-6■□□□□ 10.4
SND1Q7KZF4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.58■□□□□ 0.093e-6■□□□□ 10.4
SND1Q7KZF4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.58■□□□□ 0.093e-6■□□□□ 10.4
SND1Q7KZF4 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.89□□□□□ -0.033e-6■□□□□ 10.4
SND1Q7KZF4 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC14.65□□□□□ -0.063e-6■□□□□ 10.4
SND1Q7KZF4 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.263e-6■□□□□ 10.4
SND1Q7KZF4 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.33e-6■□□□□ 10.4
SND1Q7KZF4 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.333e-6■□□□□ 10.4
SND1Q7KZF4 HSPA8-208ENST00000526686 740 ntTSL 1 (best)5.96□□□□□ -1.464e-37■□□□□ 10.4
Retrieved 100 of 13,567 protein–RNA pairs in 61 ms