Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPAQ5VT25 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 USP39-202ENST00000409025 1946 ntTSL 5 BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 AC007952.6-201ENST00000573168 2673 ntBASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 AC003957.1-201ENST00000625108 2673 ntBASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 AC093909.1-201ENST00000504731 1122 ntBASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 PCDHAC2-203ENST00000615316 3011 ntBASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC27.73■■■□□ 2.03
CDC42BPAQ5VT25 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 AC008735.5-201ENST00000623544 497 ntBASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 AFG3L1P-217ENST00000557444 2447 ntBASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 LBH-204ENST00000406087 559 ntTSL 4 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC27.72■■■□□ 2.03
CDC42BPAQ5VT25 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 KRT18P65-201ENST00000439811 1286 ntBASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 OR7E14P-202ENST00000530490 1290 ntBASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 PMS2P7-201ENST00000506558 1336 ntBASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
CDC42BPAQ5VT25 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 RAB17-203ENST00000409576 466 ntTSL 3 BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC27.7■■■□□ 2.03
CDC42BPAQ5VT25 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 Z83851.2-201ENST00000609564 659 ntBASIC27.7■■■□□ 2.02
CDC42BPAQ5VT25 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 FABP5-202ENST00000396359 986 ntTSL 5 BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC27.69■■■□□ 2.02
CDC42BPAQ5VT25 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 CTNS-203ENST00000399306 803 ntTSL 3 BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPAQ5VT25 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 MED15P5-201ENST00000423150 992 ntBASIC27.67■■■□□ 2.02
CDC42BPAQ5VT25 AC112698.1-201ENST00000510299 916 ntBASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms