Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 AC138894.3-201ENST00000603787 634 ntBASIC21.96■■□□□ 1.11
PDS5AQ29RF7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.96■■□□□ 1.11
PDS5AQ29RF7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
PDS5AQ29RF7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.95■■□□□ 1.11
PDS5AQ29RF7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
PDS5AQ29RF7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.95■■□□□ 1.11
PDS5AQ29RF7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 KRT16P4-201ENST00000453883 522 ntBASIC21.95■■□□□ 1.1
PDS5AQ29RF7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDS5AQ29RF7 GMCL1P1-201ENST00000463439 1581 ntBASIC21.94■■□□□ 1.1
PDS5AQ29RF7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDS5AQ29RF7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 LINC00602-201ENST00000629776 2065 ntBASIC21.93■■□□□ 1.1
PDS5AQ29RF7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 MTCL1P1-201ENST00000446207 792 ntBASIC21.93■■□□□ 1.1
PDS5AQ29RF7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 AC114341.1-201ENST00000618070 349 ntBASIC21.93■■□□□ 1.1
PDS5AQ29RF7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 AC099343.3-201ENST00000605834 2503 ntBASIC21.93■■□□□ 1.1
PDS5AQ29RF7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDS5AQ29RF7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms