Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.77□□□□□ -0.05
PAX9P55771 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.77□□□□□ -0.05
PAX9P55771 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.77□□□□□ -0.05
PAX9P55771 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.77□□□□□ -0.05
PAX9P55771 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.77□□□□□ -0.05
PAX9P55771 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.77□□□□□ -0.05
PAX9P55771 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.77□□□□□ -0.05
PAX9P55771 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PAX9P55771 AC083880.1-201ENST00000608266 535 ntBASIC14.77□□□□□ -0.05
PAX9P55771 AC004264.1-201ENST00000608354 794 ntBASIC14.77□□□□□ -0.05
PAX9P55771 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.77□□□□□ -0.05
PAX9P55771 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
PAX9P55771 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PAX9P55771 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PAX9P55771 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
PAX9P55771 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PAX9P55771 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PAX9P55771 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PAX9P55771 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.76□□□□□ -0.05
PAX9P55771 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.76□□□□□ -0.05
PAX9P55771 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.76□□□□□ -0.05
PAX9P55771 NKILA-202ENST00000614771 2598 ntBASIC14.76□□□□□ -0.05
PAX9P55771 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PAX9P55771 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.76□□□□□ -0.05
PAX9P55771 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.76□□□□□ -0.05
PAX9P55771 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PAX9P55771 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.76□□□□□ -0.05
PAX9P55771 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.76□□□□□ -0.05
PAX9P55771 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.76□□□□□ -0.05
PAX9P55771 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.76□□□□□ -0.05
PAX9P55771 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 AL023806.1-201ENST00000603994 1649 ntBASIC14.76□□□□□ -0.05
PAX9P55771 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
PAX9P55771 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PAX9P55771 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PAX9P55771 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
PAX9P55771 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.75□□□□□ -0.05
PAX9P55771 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PAX9P55771 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.75□□□□□ -0.05
PAX9P55771 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 POM121L13P-201ENST00000422362 380 ntBASIC14.75□□□□□ -0.05
PAX9P55771 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.75□□□□□ -0.05
PAX9P55771 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 UNC93B4-201ENST00000505679 747 ntBASIC14.75□□□□□ -0.05
PAX9P55771 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.75□□□□□ -0.05
PAX9P55771 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.75□□□□□ -0.05
PAX9P55771 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms