Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN3P51790 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CLCN3P51790 AC104819.1-201ENST00000504587 486 ntBASIC20.16■□□□□ 0.82
CLCN3P51790 FOSL1P1-201ENST00000511041 816 ntBASIC20.16■□□□□ 0.82
CLCN3P51790 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 AC074051.2-201ENST00000565115 352 ntBASIC20.16■□□□□ 0.82
CLCN3P51790 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN3P51790 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.16■□□□□ 0.82
CLCN3P51790 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN3P51790 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.16■□□□□ 0.82
CLCN3P51790 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLCN3P51790 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CLCN3P51790 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN3P51790 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN3P51790 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN3P51790 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN3P51790 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLCN3P51790 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLCN3P51790 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN3P51790 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN3P51790 AL845331.1-201ENST00000424978 1190 ntBASIC20.15■□□□□ 0.82
CLCN3P51790 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN3P51790 AP005901.3-202ENST00000581653 237 ntBASIC20.15■□□□□ 0.82
CLCN3P51790 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLCN3P51790 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN3P51790 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CLCN3P51790 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLCN3P51790 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN3P51790 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLCN3P51790 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLCN3P51790 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN3P51790 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN3P51790 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN3P51790 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN3P51790 TPM4P1-201ENST00000436100 807 ntBASIC20.14■□□□□ 0.81
CLCN3P51790 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.14■□□□□ 0.81
CLCN3P51790 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CLCN3P51790 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.14■□□□□ 0.81
CLCN3P51790 AC138894.3-201ENST00000603787 634 ntBASIC20.14■□□□□ 0.81
CLCN3P51790 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN3P51790 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN3P51790 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN3P51790 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN3P51790 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN3P51790 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 LINC01126-201ENST00000623515 1646 ntBASIC20.13■□□□□ 0.81
CLCN3P51790 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLCN3P51790 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLCN3P51790 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN3P51790 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.13■□□□□ 0.81
CLCN3P51790 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLCN3P51790 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN3P51790 KRT17P6-201ENST00000453795 1220 ntBASIC20.13■□□□□ 0.81
CLCN3P51790 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN3P51790 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 AC111152.3-201ENST00000569699 673 ntBASIC20.13■□□□□ 0.81
CLCN3P51790 RN7SL510P-201ENST00000581311 263 ntBASIC20.13■□□□□ 0.81
CLCN3P51790 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 Z69720.1-201ENST00000601483 472 ntBASIC20.13■□□□□ 0.81
CLCN3P51790 IFNL4P1-201ENST00000607083 540 ntBASIC20.13■□□□□ 0.81
CLCN3P51790 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLCN3P51790 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN3P51790 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN3P51790 AL031598.1-201ENST00000561511 1773 ntBASIC20.13■□□□□ 0.81
CLCN3P51790 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN3P51790 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLCN3P51790 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN3P51790 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN3P51790 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCN3P51790 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
CLCN3P51790 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN3P51790 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN3P51790 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CLCN3P51790 TSPY19P-201ENST00000418461 509 ntBASIC20.12■□□□□ 0.81
CLCN3P51790 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms