Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CASP4P49662 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP4P49662 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.06■□□□□ 0.8
CASP4P49662 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.06■□□□□ 0.8
CASP4P49662 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP4P49662 GCSHP2-201ENST00000560971 527 ntBASIC20.06■□□□□ 0.8
CASP4P49662 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.06■□□□□ 0.8
CASP4P49662 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CASP4P49662 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.06■□□□□ 0.8
CASP4P49662 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CASP4P49662 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP4P49662 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASP4P49662 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASP4P49662 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CASP4P49662 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CASP4P49662 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CASP4P49662 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.06■□□□□ 0.8
CASP4P49662 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.05■□□□□ 0.8
CASP4P49662 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.05■□□□□ 0.8
CASP4P49662 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CASP4P49662 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.05■□□□□ 0.8
CASP4P49662 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.05■□□□□ 0.8
CASP4P49662 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.05■□□□□ 0.8
CASP4P49662 AL441883.1-201ENST00000566170 1045 ntBASIC20.05■□□□□ 0.8
CASP4P49662 RN7SL850P-201ENST00000579959 291 ntBASIC20.05■□□□□ 0.8
CASP4P49662 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.05■□□□□ 0.8
CASP4P49662 AC006011.2-201ENST00000621313 1158 ntBASIC20.05■□□□□ 0.8
CASP4P49662 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CASP4P49662 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 LINC01126-201ENST00000623515 1646 ntBASIC20.05■□□□□ 0.8
CASP4P49662 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASP4P49662 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 GMCL1P1-201ENST00000463439 1581 ntBASIC20.04■□□□□ 0.8
CASP4P49662 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP4P49662 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP4P49662 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 AC117947.1-201ENST00000427448 529 ntBASIC20.04■□□□□ 0.8
CASP4P49662 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.04■□□□□ 0.8
CASP4P49662 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CASP4P49662 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.04■□□□□ 0.8
CASP4P49662 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP4P49662 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP4P49662 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP4P49662 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CASP4P49662 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.04■□□□□ 0.8
CASP4P49662 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.04■□□□□ 0.8
CASP4P49662 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASP4P49662 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CASP4P49662 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP4P49662 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP4P49662 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CASP4P49662 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CASP4P49662 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP4P49662 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.03■□□□□ 0.8
CASP4P49662 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.03■□□□□ 0.8
CASP4P49662 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
CASP4P49662 MIR3917-201ENST00000580971 93 ntBASIC20.03■□□□□ 0.8
CASP4P49662 MIR3180-4-201ENST00000582223 153 ntBASIC20.03■□□□□ 0.8
CASP4P49662 AC011558.1-201ENST00000623459 338 ntBASIC20.03■□□□□ 0.8
CASP4P49662 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 AL157888.1-201ENST00000631930 593 ntBASIC20.03■□□□□ 0.8
CASP4P49662 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CASP4P49662 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CASP4P49662 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CASP4P49662 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CASP4P49662 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CASP4P49662 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASP4P49662 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms