Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHKAP35790 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.41■□□□□ 0.7
CHKAP35790 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.41■□□□□ 0.7
CHKAP35790 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.41■□□□□ 0.7
CHKAP35790 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.41■□□□□ 0.7
CHKAP35790 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.41■□□□□ 0.7
CHKAP35790 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CHKAP35790 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.41■□□□□ 0.7
CHKAP35790 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.41■□□□□ 0.7
CHKAP35790 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.41■□□□□ 0.7
CHKAP35790 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHKAP35790 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.4■□□□□ 0.7
CHKAP35790 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
CHKAP35790 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.4■□□□□ 0.7
CHKAP35790 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.4■□□□□ 0.7
CHKAP35790 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHKAP35790 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.4■□□□□ 0.7
CHKAP35790 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.4■□□□□ 0.7
CHKAP35790 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.4■□□□□ 0.7
CHKAP35790 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.4■□□□□ 0.7
CHKAP35790 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CHKAP35790 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.4■□□□□ 0.7
CHKAP35790 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CHKAP35790 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CHKAP35790 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHKAP35790 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.4■□□□□ 0.7
CHKAP35790 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHKAP35790 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHKAP35790 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHKAP35790 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.4■□□□□ 0.7
CHKAP35790 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHKAP35790 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHKAP35790 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHKAP35790 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHKAP35790 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.39■□□□□ 0.69
CHKAP35790 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHKAP35790 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHKAP35790 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.39■□□□□ 0.69
CHKAP35790 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 AL031133.1-201ENST00000406807 723 ntBASIC19.39■□□□□ 0.69
CHKAP35790 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 AL359075.1-203ENST00000462729 1002 ntBASIC19.39■□□□□ 0.69
CHKAP35790 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.39■□□□□ 0.69
CHKAP35790 GCSHP2-201ENST00000560971 527 ntBASIC19.39■□□□□ 0.69
CHKAP35790 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHKAP35790 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.39■□□□□ 0.69
CHKAP35790 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHKAP35790 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHKAP35790 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.39■□□□□ 0.69
CHKAP35790 AL109659.2-201ENST00000606809 1674 ntBASIC19.39■□□□□ 0.69
CHKAP35790 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.39■□□□□ 0.69
CHKAP35790 AC067852.2-201ENST00000590513 2313 ntBASIC19.39■□□□□ 0.69
CHKAP35790 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHKAP35790 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CHKAP35790 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHKAP35790 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHKAP35790 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHKAP35790 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHKAP35790 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHKAP35790 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHKAP35790 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CHKAP35790 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHKAP35790 STARP1-201ENST00000397973 869 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms