Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.89■□□□□ 0.94
HOXA13P31271 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA13P31271 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA13P31271 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.89■□□□□ 0.94
HOXA13P31271 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA13P31271 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 AL353692.3-201ENST00000407031 1396 ntBASIC20.89■□□□□ 0.93
HOXA13P31271 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXA13P31271 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXA13P31271 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.89■□□□□ 0.93
HOXA13P31271 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.89■□□□□ 0.93
HOXA13P31271 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA13P31271 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA13P31271 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.89■□□□□ 0.93
HOXA13P31271 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.89■□□□□ 0.93
HOXA13P31271 TPSP2-201ENST00000561760 610 ntBASIC20.89■□□□□ 0.93
HOXA13P31271 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA13P31271 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA13P31271 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA13P31271 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA13P31271 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXA13P31271 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA13P31271 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 KRT89P-201ENST00000620027 1478 ntBASIC20.88■□□□□ 0.93
HOXA13P31271 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA13P31271 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA13P31271 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA13P31271 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.88■□□□□ 0.93
HOXA13P31271 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.88■□□□□ 0.93
HOXA13P31271 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA13P31271 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA13P31271 IGHV3-41-201ENST00000613121 348 ntBASIC20.88■□□□□ 0.93
HOXA13P31271 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
HOXA13P31271 LINC01126-201ENST00000623515 1646 ntBASIC20.88■□□□□ 0.93
HOXA13P31271 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA13P31271 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA13P31271 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA13P31271 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HOXA13P31271 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXA13P31271 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HOXA13P31271 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
HOXA13P31271 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 LINC00265-3P-201ENST00000447588 903 ntBASIC20.87■□□□□ 0.93
HOXA13P31271 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.87■□□□□ 0.93
HOXA13P31271 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.87■□□□□ 0.93
HOXA13P31271 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.87■□□□□ 0.93
HOXA13P31271 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXA13P31271 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXA13P31271 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXA13P31271 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.87■□□□□ 0.93
HOXA13P31271 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HOXA13P31271 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HOXA13P31271 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXA13P31271 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 DRAXINP1-201ENST00000437611 948 ntBASIC20.86■□□□□ 0.93
HOXA13P31271 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.86■□□□□ 0.93
HOXA13P31271 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 KRT126P-201ENST00000549467 1181 ntBASIC20.86■□□□□ 0.93
HOXA13P31271 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXA13P31271 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
HOXA13P31271 MIR3652-201ENST00000579335 131 ntBASIC20.86■□□□□ 0.93
HOXA13P31271 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.86■□□□□ 0.93
HOXA13P31271 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HOXA13P31271 AC093503.3-201ENST00000624917 2352 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms