Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN6P29350 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN6P29350 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN6P29350 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 GPAT2P1-201ENST00000444924 1672 ntBASIC17.45■□□□□ 0.38
PTPN6P29350 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 CYP2D8P-201ENST00000433633 1490 ntBASIC17.45■□□□□ 0.38
PTPN6P29350 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 AC012306.2-201ENST00000609350 630 ntBASIC17.45■□□□□ 0.38
PTPN6P29350 AC097493.4-201ENST00000641197 219 ntBASIC17.45■□□□□ 0.38
PTPN6P29350 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN6P29350 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 LINC00896-202ENST00000609602 2128 ntBASIC17.45■□□□□ 0.38
PTPN6P29350 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 KRT8P50-201ENST00000562022 1438 ntBASIC17.45■□□□□ 0.38
PTPN6P29350 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN6P29350 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTPN6P29350 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN6P29350 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
PTPN6P29350 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN6P29350 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN6P29350 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTPN6P29350 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN6P29350 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN6P29350 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN6P29350 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN6P29350 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN6P29350 MFAP1P1-201ENST00000442257 1255 ntBASIC17.44■□□□□ 0.38
PTPN6P29350 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN6P29350 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN6P29350 NAPSB-206ENST00000562112 1266 ntBASIC17.44■□□□□ 0.38
PTPN6P29350 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN6P29350 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.44■□□□□ 0.38
PTPN6P29350 AC010947.1-201ENST00000623454 693 ntBASIC17.44■□□□□ 0.38
PTPN6P29350 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTPN6P29350 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN6P29350 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTPN6P29350 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN6P29350 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN6P29350 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN6P29350 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN6P29350 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN6P29350 AP000593.1-201ENST00000393668 712 ntBASIC17.43■□□□□ 0.38
PTPN6P29350 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.43■□□□□ 0.38
PTPN6P29350 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.43■□□□□ 0.38
PTPN6P29350 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN6P29350 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PTPN6P29350 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN6P29350 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN6P29350 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN6P29350 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms