Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.47■□□□□ 0.55
KRT4P19013 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT4P19013 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
KRT4P19013 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
KRT4P19013 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 KRT18P41-201ENST00000518924 1277 ntBASIC18.47■□□□□ 0.55
KRT4P19013 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT4P19013 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
KRT4P19013 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT4P19013 AC099398.1-201ENST00000567919 2776 ntBASIC18.47■□□□□ 0.55
KRT4P19013 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT4P19013 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KRT4P19013 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT4P19013 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
KRT4P19013 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KRT4P19013 AC004980.1-204ENST00000429707 299 ntBASIC18.46■□□□□ 0.55
KRT4P19013 KRT16P5-201ENST00000455284 522 ntBASIC18.46■□□□□ 0.55
KRT4P19013 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT4P19013 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.46■□□□□ 0.55
KRT4P19013 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT4P19013 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT4P19013 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
KRT4P19013 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT4P19013 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT4P19013 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT4P19013 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 PCDHA12-202ENST00000613593 2588 ntBASIC18.45■□□□□ 0.54
KRT4P19013 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT4P19013 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT4P19013 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
KRT4P19013 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
KRT4P19013 AC069544.1-201ENST00000609399 999 ntBASIC18.45■□□□□ 0.54
KRT4P19013 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
KRT4P19013 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.45■□□□□ 0.54
KRT4P19013 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT4P19013 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT4P19013 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KRT4P19013 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT4P19013 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT4P19013 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT4P19013 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT4P19013 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT4P19013 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
KRT4P19013 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT4P19013 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
KRT4P19013 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRT4P19013 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
KRT4P19013 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT4P19013 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT4P19013 AC091390.4-202ENST00000476426 537 ntBASIC18.44■□□□□ 0.54
KRT4P19013 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT4P19013 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.44■□□□□ 0.54
KRT4P19013 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT4P19013 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT4P19013 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT4P19013 AL109923.1-201ENST00000618799 583 ntBASIC18.44■□□□□ 0.54
KRT4P19013 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
KRT4P19013 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms