Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.42■□□□□ 0.86
SMPD1P17405 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SMPD1P17405 AF186996.4-201ENST00000467186 377 ntBASIC20.42■□□□□ 0.86
SMPD1P17405 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.42■□□□□ 0.86
SMPD1P17405 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.42■□□□□ 0.86
SMPD1P17405 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.42■□□□□ 0.86
SMPD1P17405 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.42■□□□□ 0.86
SMPD1P17405 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.42■□□□□ 0.86
SMPD1P17405 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.42■□□□□ 0.86
SMPD1P17405 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
SMPD1P17405 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
SMPD1P17405 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SMPD1P17405 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.41■□□□□ 0.86
SMPD1P17405 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SMPD1P17405 AC073130.3-201ENST00000624389 2278 ntBASIC20.41■□□□□ 0.86
SMPD1P17405 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.41■□□□□ 0.86
SMPD1P17405 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.41■□□□□ 0.86
SMPD1P17405 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.41■□□□□ 0.86
SMPD1P17405 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.41■□□□□ 0.86
SMPD1P17405 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
SMPD1P17405 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD1P17405 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.41■□□□□ 0.86
SMPD1P17405 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.4■□□□□ 0.86
SMPD1P17405 MTCL1P1-201ENST00000446207 792 ntBASIC20.4■□□□□ 0.86
SMPD1P17405 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SMPD1P17405 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.4■□□□□ 0.86
SMPD1P17405 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.4■□□□□ 0.86
SMPD1P17405 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.4■□□□□ 0.86
SMPD1P17405 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.4■□□□□ 0.86
SMPD1P17405 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMPD1P17405 AL355877.3-201ENST00000622820 899 ntBASIC20.4■□□□□ 0.86
SMPD1P17405 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD1P17405 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.39■□□□□ 0.86
SMPD1P17405 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.39■□□□□ 0.86
SMPD1P17405 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMPD1P17405 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMPD1P17405 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.39■□□□□ 0.86
SMPD1P17405 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMPD1P17405 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.39■□□□□ 0.85
SMPD1P17405 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.39■□□□□ 0.85
SMPD1P17405 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD1P17405 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD1P17405 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD1P17405 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SMPD1P17405 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD1P17405 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.39■□□□□ 0.85
SMPD1P17405 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SMPD1P17405 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMPD1P17405 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD1P17405 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.39■□□□□ 0.85
SMPD1P17405 AC018712.1-201ENST00000455767 687 ntBASIC20.39■□□□□ 0.85
SMPD1P17405 FGFR3P6-201ENST00000457012 610 ntBASIC20.39■□□□□ 0.85
SMPD1P17405 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.39■□□□□ 0.85
SMPD1P17405 RNPS1P1-201ENST00000507437 918 ntBASIC20.39■□□□□ 0.85
SMPD1P17405 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.39■□□□□ 0.85
SMPD1P17405 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.39■□□□□ 0.85
SMPD1P17405 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.39■□□□□ 0.85
SMPD1P17405 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
SMPD1P17405 AL049840.3-201ENST00000602669 611 ntBASIC20.39■□□□□ 0.85
SMPD1P17405 AC009154.2-201ENST00000621177 724 ntBASIC20.39■□□□□ 0.85
SMPD1P17405 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.39■□□□□ 0.85
SMPD1P17405 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD1P17405 LINC00602-201ENST00000629776 2065 ntBASIC20.39■□□□□ 0.85
SMPD1P17405 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMPD1P17405 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD1P17405 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SMPD1P17405 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.39■□□□□ 0.85
SMPD1P17405 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMPD1P17405 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.38■□□□□ 0.85
SMPD1P17405 LINC01126-201ENST00000623515 1646 ntBASIC20.38■□□□□ 0.85
SMPD1P17405 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms