Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.38□□□□□ -0.11
CD28P10747 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD28P10747 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.38□□□□□ -0.11
CD28P10747 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.37□□□□□ -0.11
CD28P10747 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD28P10747 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.37□□□□□ -0.11
CD28P10747 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD28P10747 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 UNC93B7-201ENST00000509439 705 ntBASIC14.37□□□□□ -0.11
CD28P10747 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.37□□□□□ -0.11
CD28P10747 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.37□□□□□ -0.11
CD28P10747 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD28P10747 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.37□□□□□ -0.11
CD28P10747 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CD28P10747 Z98044.1-201ENST00000632503 1764 ntBASIC14.37□□□□□ -0.11
CD28P10747 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD28P10747 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CD28P10747 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.36□□□□□ -0.11
CD28P10747 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 AC093484.2-201ENST00000580996 2166 ntBASIC14.36□□□□□ -0.11
CD28P10747 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.36□□□□□ -0.11
CD28P10747 DRAXINP1-201ENST00000437611 948 ntBASIC14.36□□□□□ -0.11
CD28P10747 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.36□□□□□ -0.11
CD28P10747 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.36□□□□□ -0.11
CD28P10747 MIR3180-4-201ENST00000582223 153 ntBASIC14.36□□□□□ -0.11
CD28P10747 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.36□□□□□ -0.11
CD28P10747 AL390719.2-201ENST00000606993 987 ntBASIC14.36□□□□□ -0.11
CD28P10747 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CD28P10747 AL357033.4-201ENST00000617703 1807 ntBASIC14.36□□□□□ -0.11
CD28P10747 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD28P10747 HTR7P1-202ENST00000624664 4411 ntBASIC14.35□□□□□ -0.11
CD28P10747 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD28P10747 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.35□□□□□ -0.11
CD28P10747 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD28P10747 AC004870.1-201ENST00000315132 882 ntBASIC14.35□□□□□ -0.11
CD28P10747 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.35□□□□□ -0.11
CD28P10747 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.35□□□□□ -0.11
CD28P10747 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms