Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLTAP09496 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLTAP09496 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLTAP09496 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLTAP09496 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLTAP09496 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLTAP09496 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLTAP09496 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.09■□□□□ 0.81
CLTAP09496 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.09■□□□□ 0.81
CLTAP09496 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.09■□□□□ 0.81
CLTAP09496 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLTAP09496 HBZP1-201ENST00000354915 429 ntBASIC20.09■□□□□ 0.81
CLTAP09496 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.09■□□□□ 0.81
CLTAP09496 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.09■□□□□ 0.81
CLTAP09496 ZNF444P1-201ENST00000559497 298 ntBASIC20.09■□□□□ 0.81
CLTAP09496 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLTAP09496 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLTAP09496 AC083849.1-201ENST00000615227 514 ntBASIC20.09■□□□□ 0.81
CLTAP09496 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CLTAP09496 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLTAP09496 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.09■□□□□ 0.81
CLTAP09496 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CLTAP09496 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLTAP09496 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CLTAP09496 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLTAP09496 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLTAP09496 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLTAP09496 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLTAP09496 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLTAP09496 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.08■□□□□ 0.81
CLTAP09496 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.08■□□□□ 0.81
CLTAP09496 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.08■□□□□ 0.81
CLTAP09496 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.08■□□□□ 0.81
CLTAP09496 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
CLTAP09496 AC079602.3-201ENST00000623931 403 ntBASIC20.08■□□□□ 0.81
CLTAP09496 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.08■□□□□ 0.81
CLTAP09496 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLTAP09496 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CLTAP09496 AC005332.8-201ENST00000622750 2735 ntBASIC20.08■□□□□ 0.8
CLTAP09496 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLTAP09496 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLTAP09496 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLTAP09496 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLTAP09496 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.07■□□□□ 0.8
CLTAP09496 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.07■□□□□ 0.8
CLTAP09496 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLTAP09496 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 AL163051.1-201ENST00000569214 1512 ntBASIC20.07■□□□□ 0.8
CLTAP09496 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.07■□□□□ 0.8
CLTAP09496 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CLTAP09496 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CLTAP09496 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.07■□□□□ 0.8
CLTAP09496 FAM86EP-206ENST00000510506 987 ntBASIC20.07■□□□□ 0.8
CLTAP09496 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.07■□□□□ 0.8
CLTAP09496 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.07■□□□□ 0.8
CLTAP09496 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLTAP09496 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLTAP09496 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLTAP09496 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.06■□□□□ 0.8
CLTAP09496 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLTAP09496 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CLTAP09496 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.06■□□□□ 0.8
CLTAP09496 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
CLTAP09496 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLTAP09496 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms