Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM2P07951 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM2P07951 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM2P07951 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
TPM2P07951 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM2P07951 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPM2P07951 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.93■□□□□ 0.94
TPM2P07951 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM2P07951 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TPM2P07951 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM2P07951 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM2P07951 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TPM2P07951 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TPM2P07951 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TPM2P07951 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
TPM2P07951 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TPM2P07951 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.93■□□□□ 0.94
TPM2P07951 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.93■□□□□ 0.94
TPM2P07951 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.92■□□□□ 0.94
TPM2P07951 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
TPM2P07951 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
TPM2P07951 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.92■□□□□ 0.94
TPM2P07951 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM2P07951 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TPM2P07951 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM2P07951 POM121L13P-201ENST00000422362 380 ntBASIC20.92■□□□□ 0.94
TPM2P07951 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM2P07951 AC004264.1-201ENST00000608354 794 ntBASIC20.92■□□□□ 0.94
TPM2P07951 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.92■□□□□ 0.94
TPM2P07951 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TPM2P07951 AL162741.1-201ENST00000565563 1558 ntBASIC20.92■□□□□ 0.94
TPM2P07951 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM2P07951 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM2P07951 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM2P07951 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.91■□□□□ 0.94
TPM2P07951 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TPM2P07951 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TPM2P07951 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TPM2P07951 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.91■□□□□ 0.94
TPM2P07951 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
TPM2P07951 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.91■□□□□ 0.94
TPM2P07951 AC108860.2-201ENST00000562760 2183 ntBASIC20.91■□□□□ 0.94
TPM2P07951 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.91■□□□□ 0.94
TPM2P07951 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TPM2P07951 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
TPM2P07951 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM2P07951 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.91■□□□□ 0.94
TPM2P07951 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TPM2P07951 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM2P07951 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TPM2P07951 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
TPM2P07951 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
TPM2P07951 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM2P07951 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TPM2P07951 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 AL160286.2-201ENST00000567150 934 ntBASIC20.9■□□□□ 0.94
TPM2P07951 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.9■□□□□ 0.94
TPM2P07951 AC083906.6-201ENST00000641366 219 ntBASIC20.9■□□□□ 0.94
TPM2P07951 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms