Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
MT-ND3P03897 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MT-ND3P03897 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MT-ND3P03897 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MT-ND3P03897 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.76■□□□□ 0.59
MT-ND3P03897 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MT-ND3P03897 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MT-ND3P03897 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-ND3P03897 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.75■□□□□ 0.59
MT-ND3P03897 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-ND3P03897 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.75■□□□□ 0.59
MT-ND3P03897 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
MT-ND3P03897 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.75■□□□□ 0.59
MT-ND3P03897 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.75■□□□□ 0.59
MT-ND3P03897 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-ND3P03897 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 KSR1P1-201ENST00000446298 240 ntBASIC18.75■□□□□ 0.59
MT-ND3P03897 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.75■□□□□ 0.59
MT-ND3P03897 NUDT16P1-203ENST00000513809 620 ntBASIC18.75■□□□□ 0.59
MT-ND3P03897 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.75■□□□□ 0.59
MT-ND3P03897 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
MT-ND3P03897 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.75■□□□□ 0.59
MT-ND3P03897 AC097493.4-201ENST00000641197 219 ntBASIC18.75■□□□□ 0.59
MT-ND3P03897 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.75■□□□□ 0.59
MT-ND3P03897 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MT-ND3P03897 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
MT-ND3P03897 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.74■□□□□ 0.59
MT-ND3P03897 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
MT-ND3P03897 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.74■□□□□ 0.59
MT-ND3P03897 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MT-ND3P03897 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 TSPY15P-201ENST00000457163 923 ntBASIC18.74■□□□□ 0.59
MT-ND3P03897 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.74■□□□□ 0.59
MT-ND3P03897 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MT-ND3P03897 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.74■□□□□ 0.59
MT-ND3P03897 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.74■□□□□ 0.59
MT-ND3P03897 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MT-ND3P03897 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND3P03897 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.73■□□□□ 0.59
MT-ND3P03897 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND3P03897 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
MT-ND3P03897 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-ND3P03897 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MT-ND3P03897 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND3P03897 UNC93B2-201ENST00000285383 730 ntBASIC18.73■□□□□ 0.59
MT-ND3P03897 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-ND3P03897 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND3P03897 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND3P03897 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MT-ND3P03897 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.73■□□□□ 0.59
MT-ND3P03897 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND3P03897 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MT-ND3P03897 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND3P03897 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
MT-ND3P03897 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms