Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.57□□□□□ -0.08
IFNA1P01562 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
IFNA1P01562 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.57□□□□□ -0.08
IFNA1P01562 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.57□□□□□ -0.08
IFNA1P01562 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.57□□□□□ -0.08
IFNA1P01562 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.57□□□□□ -0.08
IFNA1P01562 MYCNOS-205ENST00000641950 531 ntBASIC14.57□□□□□ -0.08
IFNA1P01562 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.57□□□□□ -0.08
IFNA1P01562 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.56□□□□□ -0.08
IFNA1P01562 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
IFNA1P01562 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.56□□□□□ -0.08
IFNA1P01562 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.56□□□□□ -0.08
IFNA1P01562 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.56□□□□□ -0.08
IFNA1P01562 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
IFNA1P01562 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
IFNA1P01562 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.56□□□□□ -0.08
IFNA1P01562 MIR939-201ENST00000401314 82 ntBASIC14.56□□□□□ -0.08
IFNA1P01562 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
IFNA1P01562 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.56□□□□□ -0.08
IFNA1P01562 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.56□□□□□ -0.08
IFNA1P01562 AF213884.3-201ENST00000563833 479 ntBASIC14.56□□□□□ -0.08
IFNA1P01562 UBE2DNL-204ENST00000602536 740 ntBASIC14.56□□□□□ -0.08
IFNA1P01562 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
IFNA1P01562 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
IFNA1P01562 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.56□□□□□ -0.08
IFNA1P01562 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.56□□□□□ -0.08
IFNA1P01562 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFNA1P01562 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.55□□□□□ -0.08
IFNA1P01562 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 AC011676.5-201ENST00000624864 2660 ntBASIC14.55□□□□□ -0.08
IFNA1P01562 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 PBX2P1-201ENST00000493219 1291 ntBASIC14.55□□□□□ -0.08
IFNA1P01562 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
IFNA1P01562 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.55□□□□□ -0.08
IFNA1P01562 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.55□□□□□ -0.08
IFNA1P01562 AL139384.1-201ENST00000612143 3047 ntBASIC14.55□□□□□ -0.08
IFNA1P01562 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.55□□□□□ -0.08
IFNA1P01562 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.55□□□□□ -0.08
IFNA1P01562 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.55□□□□□ -0.08
IFNA1P01562 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IFNA1P01562 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms