Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPBO95292 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.49■□□□□ 0.55
VAPBO95292 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
VAPBO95292 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
VAPBO95292 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.48■□□□□ 0.55
VAPBO95292 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 CYP2D8P-201ENST00000433633 1490 ntBASIC18.48■□□□□ 0.55
VAPBO95292 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 TSPY14P-201ENST00000303979 915 ntBASIC18.48■□□□□ 0.55
VAPBO95292 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.48■□□□□ 0.55
VAPBO95292 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.48■□□□□ 0.55
VAPBO95292 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
VAPBO95292 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VAPBO95292 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VAPBO95292 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPBO95292 KRT8P9-201ENST00000558927 1449 ntBASIC18.48■□□□□ 0.55
VAPBO95292 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPBO95292 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPBO95292 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VAPBO95292 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 INGX-201ENST00000359239 846 ntBASIC18.47■□□□□ 0.55
VAPBO95292 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 KRT18P23-201ENST00000435622 1283 ntBASIC18.47■□□□□ 0.55
VAPBO95292 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 WWOX-216ENST00000569818 525 ntBASIC18.47■□□□□ 0.55
VAPBO95292 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.47■□□□□ 0.55
VAPBO95292 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAPBO95292 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 HOXB1-202ENST00000577092 1414 ntBASIC18.47■□□□□ 0.55
VAPBO95292 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VAPBO95292 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.47■□□□□ 0.55
VAPBO95292 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
VAPBO95292 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 AL163051.1-201ENST00000569214 1512 ntBASIC18.46■□□□□ 0.55
VAPBO95292 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
VAPBO95292 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 EGLN1P1-201ENST00000531623 762 ntBASIC18.46■□□□□ 0.55
VAPBO95292 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.46■□□□□ 0.55
VAPBO95292 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.46■□□□□ 0.55
VAPBO95292 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VAPBO95292 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.46■□□□□ 0.55
VAPBO95292 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VAPBO95292 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VAPBO95292 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VAPBO95292 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAPBO95292 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.46■□□□□ 0.54
VAPBO95292 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms