Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 PPIE-208ENST00000470213 927 ntTSL 3 BASIC28.55■■■□□ 2.16
PCF11O94913 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC28.55■■■□□ 2.16
PCF11O94913 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28.55■■■□□ 2.16
PCF11O94913 AC008687.5-201ENST00000593746 558 ntBASIC28.55■■■□□ 2.16
PCF11O94913 AP001269.4-201ENST00000609611 512 ntBASIC28.55■■■□□ 2.16
PCF11O94913 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 AC009154.2-201ENST00000621177 724 ntBASIC28.55■■■□□ 2.16
PCF11O94913 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC28.55■■■□□ 2.16
PCF11O94913 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
PCF11O94913 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCF11O94913 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
PCF11O94913 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC28.54■■■□□ 2.16
PCF11O94913 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC28.54■■■□□ 2.16
PCF11O94913 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
PCF11O94913 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC28.54■■■□□ 2.16
PCF11O94913 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
PCF11O94913 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCF11O94913 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
PCF11O94913 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC28.54■■■□□ 2.16
PCF11O94913 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC28.54■■■□□ 2.16
PCF11O94913 PAM16-208ENST00000573553 722 ntTSL 2 BASIC28.54■■■□□ 2.16
PCF11O94913 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC28.53■■■□□ 2.16
PCF11O94913 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCF11O94913 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC28.53■■■□□ 2.16
PCF11O94913 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCF11O94913 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCF11O94913 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCF11O94913 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC28.53■■■□□ 2.16
PCF11O94913 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PCF11O94913 AC148477.8-201ENST00000624298 468 ntBASIC28.53■■■□□ 2.16
PCF11O94913 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
PCF11O94913 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCF11O94913 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCF11O94913 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCF11O94913 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PCF11O94913 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC28.52■■■□□ 2.16
PCF11O94913 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC28.52■■■□□ 2.16
PCF11O94913 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCF11O94913 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PCF11O94913 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCF11O94913 SLC25A1P1-201ENST00000528351 927 ntBASIC28.52■■■□□ 2.16
PCF11O94913 AL773604.1-201ENST00000617417 272 ntBASIC28.52■■■□□ 2.16
PCF11O94913 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PCF11O94913 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCF11O94913 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PCF11O94913 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PCF11O94913 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
PCF11O94913 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
PCF11O94913 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
PCF11O94913 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC28.51■■■□□ 2.15
PCF11O94913 AC132938.6-201ENST00000623828 1655 ntBASIC28.51■■■□□ 2.15
PCF11O94913 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCF11O94913 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCF11O94913 KRT18P67-201ENST00000432816 1264 ntBASIC28.51■■■□□ 2.15
PCF11O94913 FGFR3P6-201ENST00000457012 610 ntBASIC28.51■■■□□ 2.15
PCF11O94913 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.51■■■□□ 2.15
PCF11O94913 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
PCF11O94913 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.51■■■□□ 2.15
PCF11O94913 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
PCF11O94913 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
PCF11O94913 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC28.51■■■□□ 2.15
PCF11O94913 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCF11O94913 AL031598.1-201ENST00000561511 1773 ntBASIC28.51■■■□□ 2.15
PCF11O94913 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCF11O94913 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCF11O94913 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCF11O94913 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC28.51■■■□□ 2.15
PCF11O94913 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC28.51■■■□□ 2.15
PCF11O94913 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCF11O94913 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PCF11O94913 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCF11O94913 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
PCF11O94913 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC28.5■■■□□ 2.15
PCF11O94913 GZMM-202ENST00000592501 941 ntTSL 3 BASIC28.5■■■□□ 2.15
PCF11O94913 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC28.5■■■□□ 2.15
PCF11O94913 AC243591.1-201ENST00000452967 1364 ntBASIC28.5■■■□□ 2.15
PCF11O94913 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PCF11O94913 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.5■■■□□ 2.15
PCF11O94913 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCF11O94913 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCF11O94913 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
PCF11O94913 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCF11O94913 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC28.5■■■□□ 2.15
PCF11O94913 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC28.5■■■□□ 2.15
PCF11O94913 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms