Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.23□□□□□ -0.45
RTL8CO15255 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.23□□□□□ -0.45
RTL8CO15255 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
RTL8CO15255 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 AC132008.2-207ENST00000454517 770 ntBASIC12.23□□□□□ -0.45
RTL8CO15255 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 AC139887.3-201ENST00000568585 713 ntBASIC12.23□□□□□ -0.45
RTL8CO15255 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.23□□□□□ -0.45
RTL8CO15255 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.23□□□□□ -0.45
RTL8CO15255 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.23□□□□□ -0.45
RTL8CO15255 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
RTL8CO15255 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
RTL8CO15255 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 AC114341.1-201ENST00000618070 349 ntBASIC12.23□□□□□ -0.45
RTL8CO15255 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RTL8CO15255 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC12.23□□□□□ -0.45
RTL8CO15255 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.22□□□□□ -0.45
RTL8CO15255 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.22□□□□□ -0.45
RTL8CO15255 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RTL8CO15255 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.22□□□□□ -0.45
RTL8CO15255 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 AC073648.2-201ENST00000510116 352 ntBASIC12.22□□□□□ -0.45
RTL8CO15255 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.22□□□□□ -0.45
RTL8CO15255 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.22□□□□□ -0.45
RTL8CO15255 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RTL8CO15255 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RTL8CO15255 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.21□□□□□ -0.45
RTL8CO15255 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTL8CO15255 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTL8CO15255 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTL8CO15255 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.21□□□□□ -0.45
RTL8CO15255 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTL8CO15255 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RTL8CO15255 ZNF259P1-201ENST00000407656 1365 ntBASIC12.21□□□□□ -0.45
RTL8CO15255 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTL8CO15255 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RTL8CO15255 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.21□□□□□ -0.45
RTL8CO15255 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms