Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.92■□□□□ 0.3
TO15178 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.92■□□□□ 0.3
TO15178 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.92■□□□□ 0.3
TO15178 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TO15178 AL136038.4-201ENST00000603606 1261 ntBASIC16.92■□□□□ 0.3
TO15178 AL590326.2-201ENST00000625139 305 ntBASIC16.92■□□□□ 0.3
TO15178 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TO15178 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TO15178 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.92■□□□□ 0.3
TO15178 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TO15178 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TO15178 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.91■□□□□ 0.3
TO15178 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TO15178 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 FZD10-202ENST00000539839 3282 ntBASIC16.91■□□□□ 0.3
TO15178 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.91■□□□□ 0.3
TO15178 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.91■□□□□ 0.3
TO15178 GMCL1P1-201ENST00000463439 1581 ntBASIC16.91■□□□□ 0.3
TO15178 AL162741.1-201ENST00000565563 1558 ntBASIC16.91■□□□□ 0.3
TO15178 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TO15178 HBZP1-201ENST00000354915 429 ntBASIC16.91■□□□□ 0.3
TO15178 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.91■□□□□ 0.3
TO15178 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.91■□□□□ 0.3
TO15178 AC112907.2-201ENST00000448639 330 ntBASIC16.91■□□□□ 0.3
TO15178 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.91■□□□□ 0.3
TO15178 AC008687.5-201ENST00000593746 558 ntBASIC16.91■□□□□ 0.3
TO15178 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.91■□□□□ 0.3
TO15178 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.91■□□□□ 0.3
TO15178 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.91■□□□□ 0.3
TO15178 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.91■□□□□ 0.3
TO15178 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TO15178 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.91■□□□□ 0.3
TO15178 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.91■□□□□ 0.3
TO15178 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TO15178 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.91■□□□□ 0.3
TO15178 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TO15178 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.9■□□□□ 0.3
TO15178 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TO15178 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.9■□□□□ 0.3
TO15178 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.9■□□□□ 0.3
TO15178 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.9■□□□□ 0.3
TO15178 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.9■□□□□ 0.3
TO15178 AL024508.2-201ENST00000607749 1894 ntBASIC16.9■□□□□ 0.3
TO15178 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 AIRN-201ENST00000601203 4374 ntBASIC16.9■□□□□ 0.3
TO15178 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TO15178 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TO15178 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TO15178 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TO15178 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TO15178 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TO15178 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.89■□□□□ 0.3
TO15178 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.89■□□□□ 0.3
TO15178 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.89■□□□□ 0.3
TO15178 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TO15178 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.89■□□□□ 0.29
TO15178 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TO15178 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TO15178 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TO15178 KRT89P-201ENST00000620027 1478 ntBASIC16.89■□□□□ 0.29
TO15178 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TO15178 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TO15178 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.89■□□□□ 0.29
TO15178 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TO15178 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TO15178 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms