Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17■□□□□ 0.31
CPSF4LA6NMK7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CPSF4LA6NMK7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CPSF4LA6NMK7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 AC099343.3-201ENST00000605834 2503 ntBASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 RPS2P55-201ENST00000397318 883 ntBASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 AC107956.1-201ENST00000494359 873 ntBASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 AC116562.2-201ENST00000507042 360 ntBASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.99■□□□□ 0.31
CPSF4LA6NMK7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 MIR564-202ENST00000385049 94 ntBASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 AC113410.3-201ENST00000623366 203 ntBASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CPSF4LA6NMK7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 CRYGFP-201ENST00000418459 633 ntBASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 GCSHP5-201ENST00000443090 522 ntBASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 UBE2SP1-201ENST00000450587 669 ntBASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 KRT18P41-201ENST00000518924 1277 ntBASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 REXO1L9P-201ENST00000604264 2108 ntBASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms