Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LINC00896-202ENST00000609602 2128 ntBASIC19.84■□□□□ 0.77
LRRC53A6NM62 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC53A6NM62 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 SLC25A6P5-201ENST00000435663 894 ntBASIC19.83■□□□□ 0.77
LRRC53A6NM62 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC53A6NM62 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC53A6NM62 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC53A6NM62 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC53A6NM62 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC53A6NM62 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC53A6NM62 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LRRC53A6NM62 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
LRRC53A6NM62 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LRRC53A6NM62 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC53A6NM62 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC53A6NM62 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC53A6NM62 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC53A6NM62 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LRRC53A6NM62 AL163051.1-201ENST00000569214 1512 ntBASIC19.81■□□□□ 0.76
LRRC53A6NM62 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 AL355355.2-201ENST00000442321 338 ntBASIC19.81■□□□□ 0.76
LRRC53A6NM62 AP001412.1-201ENST00000608405 714 ntBASIC19.81■□□□□ 0.76
LRRC53A6NM62 AC026471.5-201ENST00000615068 467 ntBASIC19.81■□□□□ 0.76
LRRC53A6NM62 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.81■□□□□ 0.76
LRRC53A6NM62 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC53A6NM62 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC53A6NM62 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRRC53A6NM62 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC53A6NM62 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC53A6NM62 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC53A6NM62 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC53A6NM62 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC53A6NM62 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC53A6NM62 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms