Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 AC211429.1-201ENST00000415277 523 ntBASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 SLC25A6P5-201ENST00000435663 894 ntBASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV5S1A1TA0A578 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 AC005363.2-201ENST00000618631 242 ntBASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 AC079602.3-201ENST00000623931 403 ntBASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 AP000997.3-201ENST00000623333 2250 ntBASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV5S1A1TA0A578 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 AC132938.6-201ENST00000623828 1655 ntBASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 AC005521.1-201ENST00000393351 872 ntBASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 COX11P1-201ENST00000489116 835 ntBASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV5S1A1TA0A578 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TCRBV5S1A1TA0A578 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
TCRBV5S1A1TA0A578 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.14■□□□□ 0.66
TCRBV5S1A1TA0A578 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TCRBV5S1A1TA0A578 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 AC011558.1-201ENST00000623459 338 ntBASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms