Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 AC112777.1-201ENST00000540175 1423 ntBASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC2Q9Y5Z7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 ZNF259P1-201ENST00000407656 1365 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 MIR149-201ENST00000384879 89 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 BX842568.4-201ENST00000421222 227 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AC068472.1-201ENST00000474589 881 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AP001269.4-201ENST00000609611 512 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AC116407.3-201ENST00000623905 1129 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AC099343.3-201ENST00000605834 2503 ntBASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC2Q9Y5Z7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
HCFC2Q9Y5Z7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 AL032819.2-201ENST00000624543 2162 ntBASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 AC092183.1-201ENST00000469884 875 ntBASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 AC093484.2-201ENST00000580996 2166 ntBASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC2Q9Y5Z7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC2Q9Y5Z7 AC009102.3-201ENST00000623118 1491 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms