Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 AC104109.2-201ENST00000602919 1418 ntBASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDC42BPBQ9Y5S2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 AC005104.2-201ENST00000427818 678 ntBASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC27.73■■■□□ 2.03
CDC42BPBQ9Y5S2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 RPSAP43-201ENST00000402237 625 ntBASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 AC092910.1-201ENST00000482027 1129 ntBASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 AL356488.2-201ENST00000602755 427 ntBASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC27.72■■■□□ 2.03
CDC42BPBQ9Y5S2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 YBX2P1-201ENST00000394192 760 ntBASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 RNA5SP415-201ENST00000517246 115 ntBASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 AC008687.5-201ENST00000593746 558 ntBASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDC42BPBQ9Y5S2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
CDC42BPBQ9Y5S2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
CDC42BPBQ9Y5S2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CDC42BPBQ9Y5S2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CDC42BPBQ9Y5S2 AL591424.1-201ENST00000442569 1213 ntBASIC27.7■■■□□ 2.03
CDC42BPBQ9Y5S2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 LINC01126-201ENST00000623515 1646 ntBASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 UPF3AP3-201ENST00000420996 769 ntBASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
CDC42BPBQ9Y5S2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC27.69■■■□□ 2.02
CDC42BPBQ9Y5S2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 GPX1P2-201ENST00000429271 606 ntBASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC27.68■■■□□ 2.02
CDC42BPBQ9Y5S2 AC027601.4-201ENST00000611259 610 ntBASIC27.68■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms