Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 KRT18P41-201ENST00000518924 1277 ntBASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB9Q9Y5E1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 AC112777.1-201ENST00000540175 1423 ntBASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 AC104390.1-201ENST00000555663 520 ntBASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 AC111152.3-201ENST00000569699 673 ntBASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 AC092329.2-201ENST00000598402 547 ntBASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 AC092119.3-201ENST00000612618 583 ntBASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB9Q9Y5E1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 AP000593.1-201ENST00000393668 712 ntBASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 RN7SL510P-201ENST00000581311 263 ntBASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB9Q9Y5E1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 AC246785.2-201ENST00000432512 513 ntBASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 AC010240.3-201ENST00000607688 395 ntBASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 AC099343.3-201ENST00000605834 2503 ntBASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms