Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 KRT18P41-201ENST00000518924 1277 ntBASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 AL445675.2-201ENST00000620291 557 ntBASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 AC131212.4-201ENST00000623606 975 ntBASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 AC012317.2-201ENST00000623305 2251 ntBASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2D4Q9Y2X8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBE2D4Q9Y2X8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.35
UBE2D4Q9Y2X8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBE2D4Q9Y2X8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.83□□□□□ -0.35
UBE2D4Q9Y2X8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.83□□□□□ -0.35
UBE2D4Q9Y2X8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBE2D4Q9Y2X8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.83□□□□□ -0.35
UBE2D4Q9Y2X8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 AC069152.1-201ENST00000438030 544 ntBASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 AL096828.2-201ENST00000567259 1965 ntBASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2D4Q9Y2X8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 KRT16P5-201ENST00000455284 522 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms