Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 AL024508.2-201ENST00000607749 1894 ntBASIC21.03■□□□□ 0.96
PCDHA4Q9UN74 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 AC092597.1-201ENST00000487352 616 ntBASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 HYMAI.1-201ENST00000620949 238 ntBASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 AL391807.1-203ENST00000604392 2365 ntBASIC21.02■□□□□ 0.96
PCDHA4Q9UN74 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
PCDHA4Q9UN74 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
PCDHA4Q9UN74 AL162741.1-201ENST00000565563 1558 ntBASIC21.02■□□□□ 0.95
PCDHA4Q9UN74 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 LINC01126-201ENST00000623515 1646 ntBASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 AC112907.2-201ENST00000448639 330 ntBASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 AL049597.2-201ENST00000565575 961 ntBASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 AL136038.4-201ENST00000603606 1261 ntBASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 BICD1-207ENST00000551848 1962 ntBASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA4Q9UN74 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA4Q9UN74 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA4Q9UN74 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 LINC01238-205ENST00000567549 1107 ntBASIC21■□□□□ 0.95
PCDHA4Q9UN74 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA4Q9UN74 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA4Q9UN74 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA4Q9UN74 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHA4Q9UN74 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21■□□□□ 0.95
PCDHA4Q9UN74 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA4Q9UN74 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 AC135776.1-201ENST00000319817 2481 ntBASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 AC093677.2-201ENST00000600169 1863 ntBASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms