Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN1Q9UMX0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 AP002383.4-201ENST00000442518 975 ntBASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 AC113404.2-201ENST00000507884 177 ntBASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN1Q9UMX0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 KRT18P56-201ENST00000507275 550 ntBASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 AC090616.6-201ENST00000582640 721 ntBASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 AC005082.1-201ENST00000413042 2259 ntBASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 AL353692.3-201ENST00000407031 1396 ntBASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 AC126763.1-201ENST00000552015 2118 ntBASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN1Q9UMX0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 AP002414.4-201ENST00000589764 1148 ntBASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 AC092119.3-201ENST00000612618 583 ntBASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 AC098818.2-201ENST00000564925 2320 ntBASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN1Q9UMX0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms