Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPA4Q9UI42 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.93■□□□□ 0.94
CPA4Q9UI42 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 AL138831.2-201ENST00000606564 490 ntBASIC20.93■□□□□ 0.94
CPA4Q9UI42 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 MTMR9LP-203ENST00000426597 1545 ntBASIC20.93■□□□□ 0.94
CPA4Q9UI42 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPA4Q9UI42 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.93■□□□□ 0.94
CPA4Q9UI42 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 ABCD1P5-201ENST00000445663 754 ntBASIC20.92■□□□□ 0.94
CPA4Q9UI42 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 MIR3687-2-201ENST00000577708 61 ntBASIC20.92■□□□□ 0.94
CPA4Q9UI42 AC011467.2-201ENST00000598425 242 ntBASIC20.92■□□□□ 0.94
CPA4Q9UI42 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 MIR3687-1-201ENST00000614492 61 ntBASIC20.92■□□□□ 0.94
CPA4Q9UI42 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 AC022898.2-201ENST00000616822 1312 ntBASIC20.92■□□□□ 0.94
CPA4Q9UI42 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPA4Q9UI42 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.92■□□□□ 0.94
CPA4Q9UI42 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 KRT18P41-201ENST00000518924 1277 ntBASIC20.91■□□□□ 0.94
CPA4Q9UI42 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 AC025062.2-201ENST00000605477 670 ntBASIC20.91■□□□□ 0.94
CPA4Q9UI42 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.91■□□□□ 0.94
CPA4Q9UI42 PCDHAC2-203ENST00000615316 3011 ntBASIC20.91■□□□□ 0.94
CPA4Q9UI42 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPA4Q9UI42 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPA4Q9UI42 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.9■□□□□ 0.94
CPA4Q9UI42 AL356309.3-201ENST00000624132 1934 ntBASIC20.9■□□□□ 0.94
CPA4Q9UI42 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.9■□□□□ 0.94
CPA4Q9UI42 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CPA4Q9UI42 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPA4Q9UI42 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.9■□□□□ 0.94
CPA4Q9UI42 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CPA4Q9UI42 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPA4Q9UI42 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPA4Q9UI42 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPA4Q9UI42 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.9■□□□□ 0.94
CPA4Q9UI42 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPA4Q9UI42 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms