Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 HTR7P1-202ENST00000624664 4411 ntBASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 AL163051.1-201ENST00000569214 1512 ntBASIC17.67■□□□□ 0.42
VPS29Q9UBQ0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 TSPY14P-201ENST00000303979 915 ntBASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 KRT18P23-201ENST00000435622 1283 ntBASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 NOC2LP2-201ENST00000407594 1944 ntBASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VPS29Q9UBQ0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 AL133373.2-201ENST00000623187 2828 ntBASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 AC010653.2-201ENST00000623505 997 ntBASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS29Q9UBQ0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
VPS29Q9UBQ0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VPS29Q9UBQ0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.64■□□□□ 0.42
VPS29Q9UBQ0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.64■□□□□ 0.42
VPS29Q9UBQ0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VPS29Q9UBQ0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 EGLN1P1-201ENST00000531623 762 ntBASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms