Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VAPAQ9P0L0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.42■□□□□ 0.38
VAPAQ9P0L0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 KRT8P50-201ENST00000562022 1438 ntBASIC17.42■□□□□ 0.38
VAPAQ9P0L0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 MESTP1-201ENST00000404287 994 ntBASIC17.42■□□□□ 0.38
VAPAQ9P0L0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 C1QBPP2-201ENST00000528754 825 ntBASIC17.42■□□□□ 0.38
VAPAQ9P0L0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 AC073195.1-201ENST00000607241 877 ntBASIC17.42■□□□□ 0.38
VAPAQ9P0L0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPAQ9P0L0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 AP000692.2-201ENST00000608391 879 ntBASIC17.41■□□□□ 0.38
VAPAQ9P0L0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.41■□□□□ 0.38
VAPAQ9P0L0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 AC128676.1-201ENST00000454392 318 ntBASIC17.4■□□□□ 0.38
VAPAQ9P0L0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPAQ9P0L0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VAPAQ9P0L0 AC034236.2-201ENST00000606662 1610 ntBASIC17.39■□□□□ 0.38
VAPAQ9P0L0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VAPAQ9P0L0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.39■□□□□ 0.37
VAPAQ9P0L0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPAQ9P0L0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VAPAQ9P0L0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPAQ9P0L0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPAQ9P0L0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPAQ9P0L0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms