Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.97■□□□□ 0.95
ZFYVE28Q9HCC9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZFYVE28Q9HCC9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZFYVE28Q9HCC9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
ZFYVE28Q9HCC9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZFYVE28Q9HCC9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZFYVE28Q9HCC9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZFYVE28Q9HCC9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 MIR149-201ENST00000384879 89 ntBASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 UNC93B6-202ENST00000528242 690 ntBASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 AC002347.1-201ENST00000569543 541 ntBASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 AL139288.1-201ENST00000623748 933 ntBASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZFYVE28Q9HCC9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.95
ZFYVE28Q9HCC9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 MTCL1P1-201ENST00000446207 792 ntBASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 DNAJB3-202ENST00000449667 1266 ntBASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 AC125634.1-201ENST00000438758 1403 ntBASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZFYVE28Q9HCC9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 MTDHP5-201ENST00000598980 586 ntBASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 AC009154.2-201ENST00000621177 724 ntBASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.94■□□□□ 0.94
ZFYVE28Q9HCC9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE28Q9HCC9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms