Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CBX8Q9HC52 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX8Q9HC52 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 AC099343.3-201ENST00000605834 2503 ntBASIC20.56■□□□□ 0.88
CBX8Q9HC52 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 UNC93B5-201ENST00000530315 699 ntBASIC20.56■□□□□ 0.88
CBX8Q9HC52 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 AC131212.4-201ENST00000623606 975 ntBASIC20.56■□□□□ 0.88
CBX8Q9HC52 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CBX8Q9HC52 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX8Q9HC52 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 AL109659.2-201ENST00000606809 1674 ntBASIC20.55■□□□□ 0.88
CBX8Q9HC52 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 AC069152.1-201ENST00000438030 544 ntBASIC20.55■□□□□ 0.88
CBX8Q9HC52 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX8Q9HC52 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX8Q9HC52 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 AC084018.2-201ENST00000613093 2607 ntBASIC20.54■□□□□ 0.88
CBX8Q9HC52 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms