Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 RPS3AP15-201ENST00000483874 781 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC105233.1-201ENST00000498840 781 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC010460.2-201ENST00000509054 677 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC016737.1-201ENST00000605739 1068 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AL163051.2-201ENST00000618976 735 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 HYMAI.1-201ENST00000620949 238 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RNF39Q9H2S5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AP000523.1-201ENST00000398242 1049 ntBASIC20.45■□□□□ 0.86
RNF39Q9H2S5 MTCYBP7-201ENST00000419540 1134 ntBASIC20.45■□□□□ 0.86
RNF39Q9H2S5 SPDYE15P-201ENST00000424157 909 ntBASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 VN1R48P-201ENST00000448149 1036 ntBASIC20.45■□□□□ 0.86
RNF39Q9H2S5 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AL034374.2-201ENST00000605281 548 ntBASIC20.45■□□□□ 0.86
RNF39Q9H2S5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 IRX1P1-201ENST00000438849 1838 ntBASIC20.45■□□□□ 0.86
RNF39Q9H2S5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 AC106785.2-201ENST00000564385 1319 ntBASIC20.45■□□□□ 0.86
RNF39Q9H2S5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.45■□□□□ 0.86
RNF39Q9H2S5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC093484.2-201ENST00000580996 2166 ntBASIC20.44■□□□□ 0.86
RNF39Q9H2S5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC096638.2-201ENST00000434965 711 ntBASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC112907.2-201ENST00000448639 330 ntBASIC20.44■□□□□ 0.86
RNF39Q9H2S5 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC006557.1-201ENST00000591211 1085 ntBASIC20.44■□□□□ 0.86
RNF39Q9H2S5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AL691403.2-201ENST00000618460 490 ntBASIC20.44■□□□□ 0.86
RNF39Q9H2S5 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms