Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
COPS4Q9BT78 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COPS4Q9BT78 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COPS4Q9BT78 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS4Q9BT78 MTMR9LP-203ENST00000426597 1545 ntBASIC16.91■□□□□ 0.3
COPS4Q9BT78 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.91■□□□□ 0.3
COPS4Q9BT78 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 AP003097.1-201ENST00000530657 1135 ntBASIC16.9■□□□□ 0.3
COPS4Q9BT78 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.9■□□□□ 0.3
COPS4Q9BT78 AC080080.1-201ENST00000625121 2420 ntBASIC16.9■□□□□ 0.3
COPS4Q9BT78 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS4Q9BT78 REXO1L9P-201ENST00000604264 2108 ntBASIC16.9■□□□□ 0.3
COPS4Q9BT78 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
COPS4Q9BT78 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.89■□□□□ 0.3
COPS4Q9BT78 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
COPS4Q9BT78 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.89■□□□□ 0.3
COPS4Q9BT78 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 AC124067.4-201ENST00000519691 2379 ntBASIC16.89■□□□□ 0.29
COPS4Q9BT78 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPS4Q9BT78 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
COPS4Q9BT78 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 TSPY23P-201ENST00000440136 739 ntBASIC16.88■□□□□ 0.29
COPS4Q9BT78 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPS4Q9BT78 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.88■□□□□ 0.29
COPS4Q9BT78 RCC2P6-201ENST00000526625 1557 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms