Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 RCC2P3-201ENST00000418112 1537 ntBASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UPK3BQ9BT76 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.82□□□□□ -0.36
UPK3BQ9BT76 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 HTR7P1-202ENST00000624664 4411 ntBASIC12.82□□□□□ -0.36
UPK3BQ9BT76 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK3BQ9BT76 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 FZD10-202ENST00000539839 3282 ntBASIC12.81□□□□□ -0.36
UPK3BQ9BT76 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 GCSHP2-201ENST00000560971 527 ntBASIC12.81□□□□□ -0.36
UPK3BQ9BT76 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 AL121956.5-201ENST00000625261 221 ntBASIC12.81□□□□□ -0.36
UPK3BQ9BT76 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 AC093484.2-201ENST00000580996 2166 ntBASIC12.81□□□□□ -0.36
UPK3BQ9BT76 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms