Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PAAF1Q9BRP4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 AC091304.2-201ENST00000564639 760 ntBASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAAF1Q9BRP4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 LINC01126-201ENST00000623515 1646 ntBASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 Z69720.1-201ENST00000601483 472 ntBASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PAAF1Q9BRP4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.58■□□□□ 0.73
PAAF1Q9BRP4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.58■□□□□ 0.73
PAAF1Q9BRP4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.58■□□□□ 0.73
PAAF1Q9BRP4 NSUN5P1-202ENST00000421140 1535 ntBASIC19.58■□□□□ 0.73
PAAF1Q9BRP4 NSUN5P2-203ENST00000457352 1529 ntBASIC19.58■□□□□ 0.73
PAAF1Q9BRP4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PAAF1Q9BRP4 AC004870.1-201ENST00000315132 882 ntBASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 AL121772.3-201ENST00000610840 674 ntBASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PAAF1Q9BRP4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PAAF1Q9BRP4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms