Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
NPAS1Q99742 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.77■□□□□ 0.28
NPAS1Q99742 AC104390.1-201ENST00000555663 520 ntBASIC16.77■□□□□ 0.28
NPAS1Q99742 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.77■□□□□ 0.28
NPAS1Q99742 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.77■□□□□ 0.28
NPAS1Q99742 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPAS1Q99742 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS1Q99742 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.77■□□□□ 0.27
NPAS1Q99742 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS1Q99742 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.77■□□□□ 0.27
NPAS1Q99742 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS1Q99742 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS1Q99742 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NPAS1Q99742 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS1Q99742 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.77■□□□□ 0.27
NPAS1Q99742 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS1Q99742 MYLKP1-201ENST00000509077 1580 ntBASIC16.77■□□□□ 0.27
NPAS1Q99742 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPAS1Q99742 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
NPAS1Q99742 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS1Q99742 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
NPAS1Q99742 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.76■□□□□ 0.27
NPAS1Q99742 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NPAS1Q99742 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
NPAS1Q99742 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NPAS1Q99742 SPDYE15P-201ENST00000424157 909 ntBASIC16.76■□□□□ 0.27
NPAS1Q99742 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS1Q99742 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS1Q99742 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NPAS1Q99742 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS1Q99742 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.76■□□□□ 0.27
NPAS1Q99742 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.76■□□□□ 0.27
NPAS1Q99742 AC140113.3-201ENST00000605663 199 ntBASIC16.76■□□□□ 0.27
NPAS1Q99742 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
NPAS1Q99742 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.76■□□□□ 0.27
NPAS1Q99742 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NPAS1Q99742 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPAS1Q99742 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPAS1Q99742 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.75■□□□□ 0.27
NPAS1Q99742 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPAS1Q99742 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 TSPY5P-201ENST00000426936 936 ntBASIC16.75■□□□□ 0.27
NPAS1Q99742 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS1Q99742 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.75■□□□□ 0.27
NPAS1Q99742 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.75■□□□□ 0.27
NPAS1Q99742 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
NPAS1Q99742 AL157888.1-201ENST00000631930 593 ntBASIC16.75■□□□□ 0.27
NPAS1Q99742 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS1Q99742 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPAS1Q99742 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.75■□□□□ 0.27
NPAS1Q99742 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.75■□□□□ 0.27
NPAS1Q99742 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.74■□□□□ 0.27
NPAS1Q99742 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 AC112777.1-201ENST00000540175 1423 ntBASIC16.74■□□□□ 0.27
NPAS1Q99742 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NPAS1Q99742 AP000523.1-201ENST00000398242 1049 ntBASIC16.74■□□□□ 0.27
NPAS1Q99742 AL359075.1-203ENST00000462729 1002 ntBASIC16.74■□□□□ 0.27
NPAS1Q99742 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms