Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RPRD1AQ96P16 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 HLA-F-220ENST00000434407 884 ntBASIC18.95■□□□□ 0.62
RPRD1AQ96P16 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 FAM86EP-206ENST00000510506 987 ntBASIC18.95■□□□□ 0.62
RPRD1AQ96P16 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPRD1AQ96P16 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 SPDYE13P-201ENST00000445314 798 ntBASIC18.94■□□□□ 0.62
RPRD1AQ96P16 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 AL136038.3-201ENST00000561909 1096 ntBASIC18.94■□□□□ 0.62
RPRD1AQ96P16 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 AL358472.4-201ENST00000633140 710 ntBASIC18.94■□□□□ 0.62
RPRD1AQ96P16 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPRD1AQ96P16 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 WIZP1-201ENST00000531444 2299 ntBASIC18.93■□□□□ 0.62
RPRD1AQ96P16 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 PCED1CP-201ENST00000419887 785 ntBASIC18.93■□□□□ 0.62
RPRD1AQ96P16 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 AC005332.1-201ENST00000577698 1310 ntBASIC18.93■□□□□ 0.62
RPRD1AQ96P16 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 SDHAP2-201ENST00000455183 2001 ntBASIC18.93■□□□□ 0.62
RPRD1AQ96P16 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
RPRD1AQ96P16 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms