Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 AC246785.2-201ENST00000432512 513 ntBASIC14.97□□□□□ -0.01
ZNF48Q96MX3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 AC011270.2-201ENST00000624293 2550 ntBASIC14.97□□□□□ -0.01
ZNF48Q96MX3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF48Q96MX3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 AL845331.1-201ENST00000424978 1190 ntBASIC14.96□□□□□ -0.01
ZNF48Q96MX3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 AL020996.1-203ENST00000536896 2307 ntBASIC14.96□□□□□ -0.01
ZNF48Q96MX3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ZNF48Q96MX3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
ZNF48Q96MX3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ZNF48Q96MX3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZNF48Q96MX3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZNF48Q96MX3 AC093503.3-201ENST00000624917 2352 ntBASIC14.96□□□□□ -0.02
ZNF48Q96MX3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.96□□□□□ -0.02
ZNF48Q96MX3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 TPSP2-201ENST00000561760 610 ntBASIC14.95□□□□□ -0.02
ZNF48Q96MX3 AC111152.3-201ENST00000569699 673 ntBASIC14.95□□□□□ -0.02
ZNF48Q96MX3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZNF48Q96MX3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms