Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTP4Q96DX8 AC104390.1-201ENST00000555663 520 ntBASIC18.78■□□□□ 0.6
RTP4Q96DX8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.78■□□□□ 0.6
RTP4Q96DX8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.78■□□□□ 0.6
RTP4Q96DX8 RN7SL850P-201ENST00000579959 291 ntBASIC18.78■□□□□ 0.6
RTP4Q96DX8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RTP4Q96DX8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTP4Q96DX8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.78■□□□□ 0.6
RTP4Q96DX8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RTP4Q96DX8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTP4Q96DX8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTP4Q96DX8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTP4Q96DX8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTP4Q96DX8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTP4Q96DX8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
RTP4Q96DX8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.77■□□□□ 0.6
RTP4Q96DX8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RTP4Q96DX8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.77■□□□□ 0.6
RTP4Q96DX8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RTP4Q96DX8 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.77■□□□□ 0.6
RTP4Q96DX8 C2orf69P3-201ENST00000565542 1120 ntBASIC18.77■□□□□ 0.6
RTP4Q96DX8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.77■□□□□ 0.6
RTP4Q96DX8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTP4Q96DX8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
RTP4Q96DX8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
RTP4Q96DX8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.77■□□□□ 0.59
RTP4Q96DX8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTP4Q96DX8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTP4Q96DX8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
RTP4Q96DX8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
RTP4Q96DX8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.76■□□□□ 0.59
RTP4Q96DX8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RTP4Q96DX8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.76■□□□□ 0.59
RTP4Q96DX8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 AC093010.1-201ENST00000473625 1624 ntBASIC18.76■□□□□ 0.59
RTP4Q96DX8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.76■□□□□ 0.59
RTP4Q96DX8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.76■□□□□ 0.59
RTP4Q96DX8 EGLN1P1-201ENST00000531623 762 ntBASIC18.76■□□□□ 0.59
RTP4Q96DX8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.76■□□□□ 0.59
RTP4Q96DX8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.76■□□□□ 0.59
RTP4Q96DX8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTP4Q96DX8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RTP4Q96DX8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RTP4Q96DX8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.75■□□□□ 0.59
RTP4Q96DX8 AC009065.1-201ENST00000564055 1225 ntBASIC18.75■□□□□ 0.59
RTP4Q96DX8 AC005363.2-201ENST00000618631 242 ntBASIC18.75■□□□□ 0.59
RTP4Q96DX8 AC112497.1-201ENST00000624824 639 ntBASIC18.75■□□□□ 0.59
RTP4Q96DX8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.75■□□□□ 0.59
RTP4Q96DX8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RTP4Q96DX8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTP4Q96DX8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms