Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AC132008.2-207ENST00000454517 770 ntBASIC14.3□□□□□ -0.12
LINC01006Q8NI28 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AC083906.6-201ENST00000641366 219 ntBASIC14.3□□□□□ -0.12
LINC01006Q8NI28 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 AFG3L1P-217ENST00000557444 2447 ntBASIC14.29□□□□□ -0.12
LINC01006Q8NI28 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 KRT18P67-201ENST00000432816 1264 ntBASIC14.29□□□□□ -0.12
LINC01006Q8NI28 AF186996.4-201ENST00000467186 377 ntBASIC14.29□□□□□ -0.12
LINC01006Q8NI28 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 RNA5SP419-201ENST00000515908 135 ntBASIC14.29□□□□□ -0.12
LINC01006Q8NI28 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 AF228730.7-201ENST00000641842 219 ntBASIC14.29□□□□□ -0.12
LINC01006Q8NI28 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 IL9RP2-201ENST00000423948 1312 ntBASIC14.29□□□□□ -0.12
LINC01006Q8NI28 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01006Q8NI28 AC099343.3-201ENST00000605834 2503 ntBASIC14.29□□□□□ -0.12
LINC01006Q8NI28 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 AL031284.1-201ENST00000419297 478 ntBASIC14.28□□□□□ -0.12
LINC01006Q8NI28 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 AC068472.1-201ENST00000474589 881 ntBASIC14.28□□□□□ -0.12
LINC01006Q8NI28 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 AL161938.1-201ENST00000569833 2180 ntBASIC14.28□□□□□ -0.12
LINC01006Q8NI28 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 AL671883.3-201ENST00000603274 991 ntBASIC14.28□□□□□ -0.12
LINC01006Q8NI28 AC008608.2-201ENST00000606089 416 ntBASIC14.28□□□□□ -0.12
LINC01006Q8NI28 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms