Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 KRT18P16-201ENST00000510337 1294 ntBASIC13.78□□□□□ -0.2
NUP35Q8NFH5 AC142381.2-201ENST00000566120 298 ntBASIC13.78□□□□□ -0.2
NUP35Q8NFH5 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 BID-214ENST00000617586 542 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 AC010980.2-201ENST00000587099 1412 ntBASIC13.78□□□□□ -0.2
NUP35Q8NFH5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP35Q8NFH5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP35Q8NFH5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.77□□□□□ -0.2
NUP35Q8NFH5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP35Q8NFH5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP35Q8NFH5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NUP35Q8NFH5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 TUBB8P6-201ENST00000436895 1288 ntBASIC13.77□□□□□ -0.21
NUP35Q8NFH5 CNN2P6-201ENST00000439038 900 ntBASIC13.77□□□□□ -0.21
NUP35Q8NFH5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 AL096828.2-201ENST00000567259 1965 ntBASIC13.77□□□□□ -0.21
NUP35Q8NFH5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NUP35Q8NFH5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 CYP2T1P-201ENST00000432607 1285 ntBASIC13.76□□□□□ -0.21
NUP35Q8NFH5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP35Q8NFH5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms